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R version 4.0.2 (2020-06-22)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 18.04.5 LTS
Matrix products: default
BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.7.1
LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.7.1
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C
[3] LC_TIME=en_US.UTF-8 LC_COLLATE=en_US.UTF-8
[5] LC_MONETARY=en_US.UTF-8 LC_MESSAGES=en_US.UTF-8
[7] LC_PAPER=en_US.UTF-8 LC_NAME=C
[9] LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] parallel stats4 stats graphics grDevices utils datasets
[8] methods base
other attached packages:
[1] kableExtra_1.3.1 rmarkdown_2.3
[3] ggplot2_3.3.1 openxlsx_4.1.5
[5] SummarizedExperiment_1.18.1 DelayedArray_0.14.0
[7] matrixStats_0.56.0 Biobase_2.48.0
[9] GenomicRanges_1.40.0 GenomeInfoDb_1.24.2
[11] IRanges_2.22.2 S4Vectors_0.26.1
[13] BiocGenerics_0.34.0 TCGAbiolinks_2.16.4
loaded via a namespace (and not attached):
[1] httr_1.4.1 tidyr_1.1.0 viridisLite_0.3.0
[4] bit64_0.9-7 jsonlite_1.6.1 splines_4.0.2
[7] R.utils_2.9.2 assertthat_0.2.1 askpass_1.1
[10] highr_0.8 BiocFileCache_1.12.0 blob_1.2.1
[13] GenomeInfoDbData_1.2.3 yaml_2.2.1 progress_1.2.2
[16] pillar_1.4.4 RSQLite_2.2.0 lattice_0.20-41
[19] glue_1.4.1 downloader_0.4 digest_0.6.25
[22] XVector_0.28.0 rvest_0.3.6 colorspace_1.4-1
[25] htmltools_0.5.0 Matrix_1.2-18 R.oo_1.23.0
[28] plyr_1.8.6 XML_3.99-0.3 pkgconfig_2.0.3
[31] biomaRt_2.44.1 zlibbioc_1.34.0 purrr_0.3.4
[34] webshot_0.5.2 scales_1.1.1 tibble_3.0.1
[37] openssl_1.4.1 mgcv_1.8-33 generics_0.0.2
[40] farver_2.0.3 ellipsis_0.3.1 withr_2.2.0
[43] magrittr_1.5 crayon_1.3.4 evaluate_0.14
[46] memoise_1.1.0 R.methodsS3_1.8.0 nlme_3.1-149
[49] xml2_1.3.2 tools_4.0.2 data.table_1.12.8
[52] prettyunits_1.1.1 hms_0.5.3 lifecycle_0.2.0
[55] stringr_1.4.0 munsell_0.5.0 zip_2.0.4
[58] AnnotationDbi_1.50.0 compiler_4.0.2 rlang_0.4.6
[61] grid_4.0.2 RCurl_1.98-1.2 rstudioapi_0.11
[64] rappdirs_0.3.1 bitops_1.0-6 labeling_0.3
[67] gtable_0.3.0 DBI_1.1.0 curl_4.3
[70] R6_2.4.1 knitr_1.28 dplyr_1.0.0
[73] bit_1.1-15.2 readr_1.3.1 stringi_1.4.6
[76] Rcpp_1.0.4.6 png_0.1-7 vctrs_0.3.1
[79] dbplyr_1.4.4 tidyselect_1.1.0 xfun_0.14